STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B4FZ26_MAIZETransducin/WD40 repeat-like superfamily protein. (303 aa)    
Predicted Functional Partners:
K7VUA0_MAIZE
G patch domain-containing protein TGH.
    
 
 0.943
A0A1D6G7P9
RNA-binding (RRM/RBD/RNP motifs) family protein.
    
 
 0.842
A0A1D6I4Q5
Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5.
    
 
 0.842
A0A1D6M4R7
RNA-binding (RRM/RBD/RNP motifs) family protein.
    
 
 0.842
A0A1D6N5R1
RNA-binding (RRM/RBD/RNP motifs) family protein.
    
 
 0.842
Pco143623b
RNA-binding (RRM/RBD/RNP motifs) family protein.
    
 
 0.842
C4J0Q1_MAIZE
RNA recognition motif-containing protein.
    
 
 0.842
C4J3D1_MAIZE
RNA-binding (RRM/RBD/RNP motifs) family protein.
    
 
 0.842
A0A1D6FGA0
Pre-mRNA-processing-splicing factor 8A.
    
   0.801
A0A1D6FVM4
ULP_PROTEASE domain-containing protein.
    
   0.801
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.