STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pco095480PMP. (365 aa)    
Predicted Functional Partners:
Cl37436_2(612)
Protein PAF1-like protein.
      
 0.758
A0A1D6E8V3
ARM repeat superfamily protein.
    
 0.484
A0A1D6G3M9
Protein VTE6 chloroplastic.
   
 0.448
B8A2R6_MAIZE
Protein ROOT INITIATION DEFECTIVE 3.
   
 0.448
A0A1D6JLF6
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein.
      
 0.438
A0A1D6L0F3
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations; Belongs to the pescadillo family.
   
 0.428
Pco136431
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 0.428
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.