STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csu631DNA repair protein RAD23-1. (368 aa)    
Predicted Functional Partners:
A0A1D6E8G4
Protein NBR1-like protein.
   
 0.971
C0PDQ4_MAIZE
Protein NBR1-like protein.
   
 0.971
A0A1D6KPG6
DNA repair protein RAD4.
   
 0.962
Pco129049
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase.
    
 0.960
A0A1D6L8S4
Ubiquitin-60S ribosomal protein L40.
   
 0.937
B6SHW9_MAIZE
Ubiquitin-60S ribosomal protein L40-1.
   
 0.937
A0A1D6JX87
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.927
B4FG22_MAIZE
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.927
B4FSL2_MAIZE
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.927
C0HDX5_MAIZE
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.927
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.