Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Abc1 | BHLH11 | K7U8U5 | B4FVV0 | Protein kinase domain-containing protein. | Transcription factor bHLH63. | 0.773 |
Abc1 | Cl25234_-2a | K7U8U5 | B6T7T3 | Protein kinase domain-containing protein. | OHP2. | 0.665 |
BHLH11 | Abc1 | B4FVV0 | K7U8U5 | Transcription factor bHLH63. | Protein kinase domain-containing protein. | 0.773 |
BHLH11 | Cl25234_-2a | B4FVV0 | B6T7T3 | Transcription factor bHLH63. | OHP2. | 0.665 |
Cl25234_-2a | Abc1 | B6T7T3 | K7U8U5 | OHP2. | Protein kinase domain-containing protein. | 0.665 |
Cl25234_-2a | BHLH11 | B6T7T3 | B4FVV0 | OHP2. | Transcription factor bHLH63. | 0.665 |
Cl25234_-2a | FL1 | B6T7T3 | A8DMN5 | OHP2. | Protein FLOURY 1; Involved in protein body development and 22 kDa alpha-zein localization. | 0.665 |
Cl25234_-2a | LPE1 | B6T7T3 | Q41760 | OHP2. | Nucleobase-ascorbate transporter LPE1; High affinity uric acid-xanthine transporter in A.nidulans. Binds, but cannot transport ascorbic acid. Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily. | 0.772 |
Cl25234_-2a | MADS47 | B6T7T3 | K7VDU8 | OHP2. | Putative MADS-box transcription factor family protein. | 0.778 |
Cl25234_-2a | OBF1 | B6T7T3 | P24068 | OHP2. | Ocs element-binding factor 1; May contribute to developmentally specific patterns of gene expression. Binds specifically to ocs elements which are transcriptional enhancer found in the promoters of several plant genes. OCSBF-1 is able to bind to a site within each half of the ocs element as well as to animal AP-1 and CREB sites; Belongs to the bZIP family. | 0.669 |
Cl25234_-2a | Obf1 | B6T7T3 | B4FB01 | OHP2. | Octopine synthase binding factor1. | 0.752 |
Cl25234_-2a | Obf3.2 | B6T7T3 | A0A1D6G9R8 | OHP2. | Octopine synthase binding factor4. | 0.772 |
Cl25234_-2a | Ohp1 | B6T7T3 | A0A1D6L7T5 | OHP2. | Opaque2 heterodimerizing protein 1. | 0.890 |
Cl25234_-2a | PBF | B6T7T3 | O24463 | OHP2. | Dof zinc finger protein PBF; Transcription factor that binds specifically to a 5'-AA[AG]G- 3' consensus core sequence. May enhance the DNA binding of the bZIP transcription factor Opaque-2 to O2 binding site elements. | 0.770 |
FL1 | Cl25234_-2a | A8DMN5 | B6T7T3 | Protein FLOURY 1; Involved in protein body development and 22 kDa alpha-zein localization. | OHP2. | 0.665 |
FL1 | MADS47 | A8DMN5 | K7VDU8 | Protein FLOURY 1; Involved in protein body development and 22 kDa alpha-zein localization. | Putative MADS-box transcription factor family protein. | 0.502 |
FL1 | Ohp1 | A8DMN5 | A0A1D6L7T5 | Protein FLOURY 1; Involved in protein body development and 22 kDa alpha-zein localization. | Opaque2 heterodimerizing protein 1. | 0.677 |
LPE1 | Cl25234_-2a | Q41760 | B6T7T3 | Nucleobase-ascorbate transporter LPE1; High affinity uric acid-xanthine transporter in A.nidulans. Binds, but cannot transport ascorbic acid. Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily. | OHP2. | 0.772 |
LPE1 | Ohp1 | Q41760 | A0A1D6L7T5 | Nucleobase-ascorbate transporter LPE1; High affinity uric acid-xanthine transporter in A.nidulans. Binds, but cannot transport ascorbic acid. Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily. | Opaque2 heterodimerizing protein 1. | 0.777 |
MADS47 | Cl25234_-2a | K7VDU8 | B6T7T3 | Putative MADS-box transcription factor family protein. | OHP2. | 0.778 |
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