STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B6THD1_MAIZECell Division Protein AAA ATPase family; Belongs to the AAA ATPase family. (506 aa)    
Predicted Functional Partners:
C0PLU9_MAIZE
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.627
A0A1D6G5N8
50S ribosomal protein L27 chloroplastic.
  
 
 0.604
A0A1D6ILX8
Ribosomal protein S5 domain 2-like superfamily protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.541
Lem1
30S ribosomal protein S9 chloroplastic; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.541
A0A1D6LJZ2
30S ribosomal protein S16 chloroplastic.
  
 
 0.516
B4FVT8_MAIZE
Small subunit ribosomal protein 16.
  
 
 0.516
rps16
30S ribosomal protein S16, chloroplastic.
  
 
 0.516
A0A1D6HX01
Prohibitin.
   
 0.505
Phb4
Prohibitin.
   
 0.505
PHB1
Prohibitin.
   
 0.505
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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