STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pco117429Glutamate decarboxylase; Belongs to the group II decarboxylase family. (489 aa)    
Predicted Functional Partners:
B4F7V8_MAIZE
Pantoate--beta-alanine ligase.
  
 
 0.943
B4FFP2_MAIZE
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.941
GDH1
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.941
A0A1D6DZK7
Adenosylmethionine aminotransferase1; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.937
A0A1D6PUC0
Putative aminotransferase class III superfamily protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.937
B4G0T5_MAIZE
Gamma-aminobutyrate transaminase POP2 mitochondrial; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.937
B6SSX2_MAIZE
Gamma-glutamyltranspeptidase 1.
     
 0.921
A0A1D6G2B5
Glutamate synthase 1 [NADH] chloroplastic.
     
 0.909
A0A1D6NFK0
Glutamate synthase 1 [NADH] chloroplastic.
     
 0.909
Bas1
Beta alanine synthase1.
    
 0.907
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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