STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cl62390_1Trypsin family protein with PDZ domain. (427 aa)    
Predicted Functional Partners:
A0A1D6MDW7
26S proteasome regulatory subunit RPN13.
   
 0.668
A0A1D6H0T6
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.612
K7UFV4_MAIZE
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
 0.612
A0A1D6HI27
Protease Do-like 7.
      
 0.611
A0A1D6M7H2
Glyoxysomal processing protease glyoxysomal.
      
 0.606
A0A1D6KI98
Peroxisome biogenesis protein 5.
    
 0.590
A0A1D6QKF6
Peroxisome biogenesis protein 5.
    
 0.590
TIDP3431
26S proteasome non-ATPase regulatory subunit 6-like protein.
    
 0.579
B4FVL1_MAIZE
26S proteasome non-ATPase regulatory subunit 6-like protein.
    
 0.579
A0A1D6FHL3
26S proteasome non-ATPase regulatory subunit 12 homolog B.
    
 0.573
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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