AY106518 protein (Zea mays) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

AY106518

Late embryogenesis abundant protein, group 3. (231 aa)

Predicted Functional Partners:

Pco134925

0.785

B6UH67_MAIZE

0.785

B6SN63_MAIZE

0.779

Magi2594

0.778

B6SI42_MAIZE

0.690

Lea14A

0.674

Gpm65

0.661

A0A1D6PSA9

0.603

IDP258

0.603

C0PNI3_MAIZE

0.603

Your Current Organism:

Zea mays

NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6PSA9	AY106518	A0A1D6PSA9	B6UI06	Saposin B domain-containing protein.	Late embryogenesis abundant protein, group 3.	0.603
A0A1D6PSA9	B6SI42_MAIZE	A0A1D6PSA9	B6SI42	Saposin B domain-containing protein.	Oleosin.	0.660
A0A1D6PSA9	B6SN63_MAIZE	A0A1D6PSA9	B6SN63	Saposin B domain-containing protein.	Late embryogenesis abundant protein D-34.	0.501
A0A1D6PSA9	B6UH67_MAIZE	A0A1D6PSA9	B6UH67	Saposin B domain-containing protein.	Late embryogenesis abundant protein D-34.	0.603
A0A1D6PSA9	C0PNI3_MAIZE	A0A1D6PSA9	C0PNI3	Saposin B domain-containing protein.	Saposin B domain-containing protein.	0.900
A0A1D6PSA9	Gpm65	A0A1D6PSA9	B4G1Z2	Saposin B domain-containing protein.	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.	0.778
A0A1D6PSA9	IDP258	A0A1D6PSA9	B4FVJ2	Saposin B domain-containing protein.	Saposin B domain-containing protein.	0.900
A0A1D6PSA9	Magi2594	A0A1D6PSA9	B4F9K0	Saposin B domain-containing protein.	Late embryogenesis abundant protein group 2.	0.430
A0A1D6PSA9	Pco134925	A0A1D6PSA9	B4G1C1	Saposin B domain-containing protein.	Putative desiccation-related protein LEA14.	0.603
AY106518	A0A1D6PSA9	B6UI06	A0A1D6PSA9	Late embryogenesis abundant protein, group 3.	Saposin B domain-containing protein.	0.603
AY106518	B6SI42_MAIZE	B6UI06	B6SI42	Late embryogenesis abundant protein, group 3.	Oleosin.	0.690
AY106518	B6SN63_MAIZE	B6UI06	B6SN63	Late embryogenesis abundant protein, group 3.	Late embryogenesis abundant protein D-34.	0.779
AY106518	B6UH67_MAIZE	B6UI06	B6UH67	Late embryogenesis abundant protein, group 3.	Late embryogenesis abundant protein D-34.	0.785
AY106518	C0PNI3_MAIZE	B6UI06	C0PNI3	Late embryogenesis abundant protein, group 3.	Saposin B domain-containing protein.	0.603
AY106518	Gpm65	B6UI06	B4G1Z2	Late embryogenesis abundant protein, group 3.	Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family.	0.661
AY106518	IDP258	B6UI06	B4FVJ2	Late embryogenesis abundant protein, group 3.	Saposin B domain-containing protein.	0.603
AY106518	Lea14A	B6UI06	B6UH99	Late embryogenesis abundant protein, group 3.	Late embryogenesis abundant protein Lea14-A.	0.674
AY106518	Magi2594	B6UI06	B4F9K0	Late embryogenesis abundant protein, group 3.	Late embryogenesis abundant protein group 2.	0.778
AY106518	Pco134925	B6UI06	B4G1C1	Late embryogenesis abundant protein, group 3.	Putative desiccation-related protein LEA14.	0.785
B6SI42_MAIZE	A0A1D6PSA9	B6SI42	A0A1D6PSA9	Oleosin.	Saposin B domain-containing protein.	0.660