B8A1J9_MAIZE protein (Zea mays) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

B8A1J9_MAIZE

Ribosomal protein L29 family protein. (138 aa)

Predicted Functional Partners:

Pco061453

0.985

Magi94754

0.968

Cl10949_1

0.967

A0A1D6EL59

0.964

A0A1D6IKL2

0.963

Pco148683

0.963

A0A1D6HJB6

0.955

Si603005c07

0.955

B4FZB4_MAIZE

0.953

A0A1D6GXW0

0.952

Your Current Organism:

Zea mays

NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6EL59	A0A1D6GXW0	A0A1D6EL59	A0A1D6GXW0	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.	0.963
A0A1D6EL59	A0A1D6HJB6	A0A1D6EL59	A0A1D6HJB6	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family.	Uncharacterized protein.	0.959
A0A1D6EL59	A0A1D6IKL2	A0A1D6EL59	A0A1D6IKL2	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family.	Mitochondrial ribosomal protein L37.	0.871
A0A1D6EL59	B4FZB4_MAIZE	A0A1D6EL59	B4FZB4	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family.	50S ribosomal protein L17 chloroplastic; Belongs to the bacterial ribosomal protein bL17 family.	0.957
A0A1D6EL59	B8A1J9_MAIZE	A0A1D6EL59	B8A1J9	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L29 family protein.	0.964
A0A1D6EL59	Cl10949_1	A0A1D6EL59	C0P2I3	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L19 family protein.	0.983
A0A1D6EL59	Magi94754	A0A1D6EL59	K7W866	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family.	Decoy.	0.977
A0A1D6EL59	Pco061453	A0A1D6EL59	B8A1U6	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L23/L15e family protein.	0.967
A0A1D6EL59	Pco148683	A0A1D6EL59	A0A1D6L861	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family.	50S ribosomal protein L4.	0.982
A0A1D6EL59	Si603005c07	A0A1D6EL59	B4FSJ5	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family.	Ribosomal protein L17 family protein; Belongs to the bacterial ribosomal protein bL17 family.	0.959
A0A1D6GXW0	A0A1D6EL59	A0A1D6GXW0	A0A1D6EL59	Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family.	0.963
A0A1D6GXW0	A0A1D6HJB6	A0A1D6GXW0	A0A1D6HJB6	Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.	Uncharacterized protein.	0.973
A0A1D6GXW0	A0A1D6IKL2	A0A1D6GXW0	A0A1D6IKL2	Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.	Mitochondrial ribosomal protein L37.	0.927
A0A1D6GXW0	B4FZB4_MAIZE	A0A1D6GXW0	B4FZB4	Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.	50S ribosomal protein L17 chloroplastic; Belongs to the bacterial ribosomal protein bL17 family.	0.973
A0A1D6GXW0	B8A1J9_MAIZE	A0A1D6GXW0	B8A1J9	Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein L29 family protein.	0.952
A0A1D6GXW0	Cl10949_1	A0A1D6GXW0	C0P2I3	Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein L19 family protein.	0.964
A0A1D6GXW0	Magi94754	A0A1D6GXW0	K7W866	Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.	Decoy.	0.966
A0A1D6GXW0	Pco061453	A0A1D6GXW0	B8A1U6	Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein L23/L15e family protein.	0.951
A0A1D6GXW0	Pco148683	A0A1D6GXW0	A0A1D6L861	Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.	50S ribosomal protein L4.	0.984
A0A1D6GXW0	Si603005c07	A0A1D6GXW0	B4FSJ5	Ribosomal protein S5 family protein; Belongs to the universal ribosomal protein uS5 family.	Ribosomal protein L17 family protein; Belongs to the bacterial ribosomal protein bL17 family.	0.973