STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TCP23Transcription factor TCP5. (298 aa)    
Predicted Functional Partners:
TCP16
Transcription factor TCP21.
    
 
 0.893
HB21
Homeobox protein ATH1.
      
 0.779
HB53
Homeobox-leucine zipper protein ATHB-4.
    
 
 0.774
A0A1D6KQJ6
Dormancy associated1.
      
 0.756
TCP14
Transcription factor TCP21.
    
 
 0.671
Rel2
Ramosa 1 enhancer locus 2.
      
 0.555
Umc2204
Grassy tillers1.
      
 0.502
TCP20
Transcription factor TCP11.
    
 
 0.454
TCP26
Transcription factor TCP14.
    
 
 0.445
A0A1D6NRT2
Transcription factor TCP14.
    
 
 0.445
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.