STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cl11715_1Tubby-like F-box protein; Belongs to the TUB family. (456 aa)    
Predicted Functional Partners:
A0A1D6G1L4
Two pore calcium channel protein 1.
    
 0.570
A0A1D6M5S1
Aldo-keto reductase family 4 member C9.
      
 0.540
KN-1
Homeotic protein knotted-1; Binds to RNA. Possible transcription factor that regulates genes involved in development. Mutations in KN-1 alter leaf development. Foci of cells along the lateral vein do not differentiate properly but continue to divide, forming knots. May participate in the switch from indeterminate to determinate cell fates. Probably binds to the DNA sequence 5'-TGAC-3'.
      
 0.499
B4FID4_MAIZE
Aldo-keto reductase family 4 member C9.
      
 0.429
TIDP2673
Aldo-keto reductase family 4 member C9.
      
 0.429
mads1
MADS transcription factor.
      
 0.426
MADS4
Developmental protein SEPALLATA 2.
      
 0.422
TIP5-1
Aquaporin TIP5-1; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
      
 0.422
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.