STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gpm518Aspartate--tRNA ligase 2 cytoplasmic. (546 aa)    
Predicted Functional Partners:
GATB
Glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
 
 0.993
A0A1D6JT86
Methionine--tRNA ligase cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.990
K7UJ45_MAIZE
Methionine--tRNA ligase cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.990
K7VKI2_MAIZE
Methionine--tRNA ligase cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.990
A0A1D6ML85
Aspartate--tRNA ligase chloroplastic/mitochondrial.
  
0.955
A0A1D6E223
Proline--tRNA ligase cytoplasmic.
  
 0.948
A0A1D6HSW9
Proline--tRNA ligase chloroplastic/mitochondrial.
  
 0.948
K7UDG5_MAIZE
Proline--tRNA ligase cytoplasmic.
  
 0.948
A0A1D6FGX9
Aspartate--tRNA ligase 2 cytoplasmic.
  
  
 
0.900
A0A1D6JNB0
Glutamate--tRNA ligase cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.872
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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