STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0PKX6_MAIZESmr (Small MutS Related) domain-containing protein. (391 aa)    
Predicted Functional Partners:
Umc1106
NADH-ubiquinone oxidoreductase B18 subunit4.
   
   0.792
A0A1D6IAI2
Uncharacterized protein.
   
   0.722
B6STD5_MAIZE
Uncharacterized protein.
   
   0.722
A0A1D6JLG7
NADH ubiquinone oxidoreductase B14 subunit5.
   
   0.648
B6SHX4_MAIZE
NADH ubiquinone oxidoreductase B22-like subunit; Belongs to the complex I LYR family.
    
   0.591
B6TJK3_MAIZE
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-A.
    
   0.588
Si946088d04
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9 mitochondrial.
   
   0.587
B6SP36_MAIZE
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1.
    
   0.586
Pco064868
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2.
   
   0.518
C0PMW0_MAIZE
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2.
   
   0.518
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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