STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUB8TUB transcription factor; Belongs to the TUB family. (402 aa)    
Predicted Functional Partners:
IDP475
SKP1-like protein 21; Belongs to the SKP1 family.
    
 
 0.782
A0A1D6JK98
SKP1-like protein 21; Belongs to the SKP1 family.
    
 
 0.782
A0A1D6PM10
SKP1-like protein 21; Belongs to the SKP1 family.
    
 
 0.782
A0A1D6PU28
SKP1-like protein 21; Belongs to the SKP1 family.
    
 
 0.782
A0A1D6E556
Glyoxal oxidase-related protein.
      
 0.776
A0A1D6E558
Glyoxal oxidase-related protein.
      
 0.776
A0A1D6GQY9
Glyoxal oxidase-related protein.
      
 0.776
A0A1D6LAC3
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein.
      
 0.662
PDC1
Pyruvate decarboxylase 1.
      
 0.660
A0A1D6IMK7
NAC domain transcription factor.
      
 0.610
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.