STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cl61634_1Peptidylprolyl isomerase. (226 aa)    
Predicted Functional Partners:
A0A1D6JYG6
Photosynthetic NDH subunit of lumenal location 1 chloroplastic.
   
 
 0.965
B4G054_MAIZE
Photosynthetic NDH subunit of subcomplex B 5 chloroplastic.
   
 
 0.963
A0A096RWW7
Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family.
   
 
 0.948
A0A1D6HK95
Photosynthetic NDH subunit of subcomplex B 4 chloroplastic.
   
 
 0.946
B4FVP6_MAIZE
Electron carrier/ electron transporter/ iron ion binding protein.
   
 
 0.943
A0A1D6N5I0
NAD(P)H-quinone oxidoreductase subunit N chloroplastic.
   
 
 0.940
A0A1D6HBD7
Photosynthetic NDH subunit of lumenal location 2 chloroplastic.
   
 
 0.930
K7UG66_MAIZE
Oxygen evolving enhancer protein 3.
   
 
 0.930
B6SP99_MAIZE
Photosynthetic NDH subunit of subcomplex B 1 chloroplastic.
  
 
 0.914
K7TV49_MAIZE
Photosynthetic NDH subunit of subcomplex B 1 chloroplastic.
  
 
 0.914
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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