STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4JB18_MAIZEZinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein. (517 aa)    
Predicted Functional Partners:
A0A1D6GP16
Nijmegen breakage syndrome 1 protein.
    
 0.940
A0A1D6JRL3
Retinoblastoma-binding protein-like.
   
 0.899
C0PG09_MAIZE
Structural maintenance of chromosomes protein 6B.
   
 
 0.891
A0A1D6M648
Putative PWWP domain family protein.
   
 0.864
A0A1D6MNK7
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.
   
 0.864
B4FWT4_MAIZE
Os12g0638500-like protein.
   
 0.864
K7UFB2_MAIZE
DNA repair protein RAD50.
    
 0.855
A0A1D6LC75
ATP-dependent DNA helicase 2 subunit KU80; Single-stranded DNA-dependent ATP-dependent helicase.
    
 0.827
A0A1D6GTS1
Structural maintenance of chromosomes protein 5.
   
 
 0.820
A0A1D6G673
Small ubiquitin-related modifier 2.
    
 0.800
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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