STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4JBY4_MAIZERING-type E3 ubiquitin transferase. (825 aa)    
Predicted Functional Partners:
A0A1D6N6Y4
Glycerol-3-phosphosphate acyltransferase1.
  
     0.474
A0A1D6JPX5
Glycerol-3-phosphate acyltransferase 5.
  
     0.454
C0P571_MAIZE
Glycerol-3-phosphate acyltransferase 1.
  
     0.444
B6U1Y2_MAIZE
Methyltransferase.
  
     0.432
B4F9Z7_MAIZE
Glycerol-3-phosphate acyltransferase 5.
  
     0.427
A0A1D6N985
Ribonuclease III domain protein1.
  
     0.423
RNC1
Ribonuclease III domain-containing protein RNC1, chloroplastic; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on both subgroup IIA and subgroup IIB introns. The substrates of the subgroup II also require the CRM domain proteins CAF1 or CAF2. Binds both single-stranded and double-stranded RNA non-specifically, but lacks endonuclease activity. Required for plastid ribosome biogenesis.
  
     0.419
B6SRR0_MAIZE
Glycerol-3-phosphate acyltransferase 8.
  
     0.419
A0A1D6EH77
Putative methyltransferase PMT25.
  
 
   0.416
B8A2X2_MAIZE
Glycerol-3-phosphate acyltransferase 5.
  
     0.412
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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