STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKX12Cytokinin dehydrogenase 12. (528 aa)    
Predicted Functional Partners:
B6T4K7_MAIZE
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
    
 0.604
B4F8B2_MAIZE
Peroxisome biogenesis protein 7.
     
 0.571
Cl37436_2(612)
Protein PAF1-like protein.
      
 0.558
A0A1D6LK61
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.519
cox3
Cytochrome c oxidase subunit 3; Subunits I, II and III form the functional core of the enzyme complex.
    
 0.514
A0A1D6E7V9
Malate synthase; Belongs to the malate synthase family.
  
 
 0.513
LIP
Malate synthase, glyoxysomal.
  
 
 0.513
B4FFP6_MAIZE
Nascent polypeptide-associated complex subunit beta.
    
 
 0.502
B6TBD4_MAIZE
Nascent polypeptide-associated complex subunit beta.
    
 
 0.502
A0A1D6H8R4
Electron transfer flavoprotein subunit alpha mitochondrial.
  
 
 0.467
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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