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H1 protein (Zea mays) - STRING interaction network
"H1" - Histone H1 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H1Histone H1 ; Histones H1 are necessary for the condensation of nucleosome chains into higher-order structures (261 aa)    
Predicted Functional Partners:
SMH2
Hypothetical protein LOC100273130 ; Binds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand (298 aa)
           
  0.563
SMH5
Single myb histone 5 ; Binds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand (286 aa)
           
  0.561
umc1149
Hypothetical protein LOC100280390 (375 aa)
           
  0.559
GRMZM2G475899_P01
Histone H3.2 (245 aa)
           
  0.529
GRMZM2G447984_P01
Histone H3.2 (169 aa)
           
  0.529
GRMZM2G179005_P01
Histone H3.2 (171 aa)
           
  0.529
LOC778434
Core alpha 1,3-fucosyltransferase (498 aa)
           
  0.468
RAB2B
Ras-related protein Rab-2-B ; Protein transport. Probably involved in vesicular traffic (By similarity) (210 aa)
     
        0.465
GRMZM2G095084_P02
Uncharacterized protein (623 aa)
           
  0.459
Zm.102086
Histone H2B ; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (148 aa)
           
  0.429
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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