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ppr5 protein (Zea mays) - STRING interaction network
"ppr5" - Pentatricopeptide repeat protein 5 in Zea mays
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
ppr5Pentatricopeptide repeat protein 5 (499 aa)    
Predicted Functional Partners:
CAF1
CRS2-associated factor 1, chloroplastic Precursor (Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1); Required for the splicing of group IIB introns in chloroplasts. Forms splicing particles with CRS2. Interacts with RNA and confers intron specificity of the splicing particles (392 aa)
     
   
  0.732
RNC1
Chloroplast ribonuclease III domain protein ; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on both subgroup IIA and subgroup IIB introns. The substrates of the subgroup II also require the CRM domain proteins CAF1 or CAF2. Binds both single-stranded and double-stranded RNA non-specifically, but lacks endonuclease activity. Required for plastid ribosome biogenesis (525 aa)
     
   
  0.620
CFM3
CRM family member 3 ; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3 and CAF1 or CAF2 (PubMed-18799595). May influence the biogenesis of the mitochondrial small ribosomal subunit (By similarity) (1523 aa)
     
   
  0.564
GRMZM2G007453_P01
Hypothetical protein LOC100383040 (422 aa)
           
  0.529
WHY1
LOC100170235 ; Single-stranded DNA and RNA binding protein that maintains plastid genome stability by preventing break-induced and short homology-dependent illegitimate recombinations. Functions in RNA metabolism and is involved in the maturation of the atpF and 23S ribosomal RNAs (266 aa)
     
   
  0.524
ARID6
ARID transcription factor (453 aa)
           
  0.523
Zm.6433
CFM2 alternative polyadenylation form 1 Fragment (1039 aa)
     
   
  0.519
Zm.21536
SURF1 (344 aa)
     
   
  0.497
cox1
Cytochrome c oxidase subunit 1 (EC 1.9.3.1)(Cytochrome c oxidase polypeptide I); Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (528 aa)
           
  0.496
atpI
ATP synthase subunit a, chloroplastic (F-ATPase subunit IV)(ATP synthase F0 sector subunit a); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane (247 aa)
           
  0.494
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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