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RNC1 protein (Zea mays) - STRING interaction network
"RNC1" - Chloroplast ribonuclease III domain protein in Zea mays
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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RNC1Chloroplast ribonuclease III domain protein ; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on both subgroup IIA and subgroup IIB introns. The substrates of the subgroup II also require the CRM domain proteins CAF1 or CAF2. Binds both single-stranded and double-stranded RNA non-specifically, but lacks endonuclease activity. Required for plastid ribosome biogenesis (525 aa)    
Predicted Functional Partners:
CAF1
CRS2-associated factor 1, chloroplastic Precursor (Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1); Required for the splicing of group IIB introns in chloroplasts. Forms splicing particles with CRS2. Interacts with RNA and confers intron specificity of the splicing particles (392 aa)
     
   
  0.762
Zm.25003
Hypothetical protein LOC100277394 (577 aa)
     
   
  0.759
WHY1
LOC100170235 ; Single-stranded DNA and RNA binding protein that maintains plastid genome stability by preventing break-induced and short homology-dependent illegitimate recombinations. Functions in RNA metabolism and is involved in the maturation of the atpF and 23S ribosomal RNAs (266 aa)
     
   
  0.717
Zm.6433
CFM2 alternative polyadenylation form 1 Fragment (1039 aa)
     
   
  0.642
Zm.33605
Pentatricopeptide repeat-containing protein At2g15820-like (783 aa)
     
   
  0.639
CFM3
CRM family member 3 ; Binds specific group II introns in chloroplasts and facilitates their splicing. Acts on subgroup IIB introns. The substrates of the subgroup IIB also require the CRM domain proteins CAF1 or CAF2, with a simultaneous binding of CFM3 and CAF1 or CAF2 (PubMed-18799595). May influence the biogenesis of the mitochondrial small ribosomal subunit (By similarity) (1523 aa)
     
   
  0.632
ppr5
Pentatricopeptide repeat protein 5 (499 aa)
     
   
  0.620
CRS1
Chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic Precursor (Protein CHLOROPLAST RNA SPLICING 1)(Chloroplastic RNA splicing factor 1); Required for the splicing of group IIA introns in chloroplasts, and especially for atpF, by regulating the intron folding. Forms splicing particles with RNA. Also involved in chloroplast protein translation (715 aa)
     
   
  0.578
ppr2
Hypothetical protein LOC100383216 (571 aa)
     
   
  0.562
Zm.76158
Ribonucleoprotein A (268 aa)
     
        0.545
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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