STRINGSTRING
SMH6 protein (Zea mays) - STRING interaction network
"SMH6" - Single myb histone 6 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMH6Single myb histone 6 ; Binds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand (317 aa)    
Predicted Functional Partners:
GRMZM5G857930_P05
Hypothetical protein LOC100273602 (482 aa)
       
 
  0.778
pco136451a
Hypothetical protein LOC100273977 (481 aa)
       
 
  0.778
Zm.24480
DNA repair protein XRCC3 homolog (291 aa)
           
  0.721
m16
MADS16 (209 aa)
           
  0.716
HAK8
Hypothetical protein LOC100279541 ; Potassium transporter (794 aa)
       
      0.646
GRMZM2G166738_P04
Hypothetical protein LOC100279538 (859 aa)
       
      0.646
tbp2
TATA-box-binding protein 2 (TATA-box factor 2)(TATA-binding factor 2)(TATA sequence-binding protein 2)(TBP-2)(Transcription initiation factor TFIID TBP-2 subunit) (392 aa)
       
      0.550
TBP1
TATA-box-binding protein 1 (TATA-box factor 1)(TATA-binding factor 1)(TATA sequence-binding protein 1)(TBP-1)(Transcription initiation factor TFIID TBP-1 subunit); General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre- initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II (287 aa)
       
      0.550
aprl2
Adenosine 5’-phosphosulfate reductase 2 (456 aa)
           
  0.547
aprl1
Adenosine 5’-phosphosulfate reductase-like1 (515 aa)
           
  0.547
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
Server load: low (14%) [HD]