STRINGSTRING
SMH5 protein (Zea mays) - STRING interaction network
"SMH5" - Single myb histone 5 in Zea mays
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMH5Single myb histone 5 ; Binds preferentially double-stranded telomeric repeats, but may also bind to the single telomeric strand (286 aa)    
Predicted Functional Partners:
GRMZM5G857930_P05
Hypothetical protein LOC100273602 (482 aa)
       
 
  0.778
pco136451a
Hypothetical protein LOC100273977 (481 aa)
       
 
  0.778
Zm.24480
DNA repair protein XRCC3 homolog (291 aa)
           
  0.721
umc1149
Hypothetical protein LOC100280390 (375 aa)
           
  0.721
smh3
Single myb histone3 ; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins (433 aa)
           
  0.721
GRMZM2G063151_P01
Initiator binding protein (715 aa)
           
  0.720
HAK8
Hypothetical protein LOC100279541 ; Potassium transporter (794 aa)
       
      0.646
GRMZM2G166738_P04
Hypothetical protein LOC100279538 (859 aa)
       
      0.646
H1
Histone H1 ; Histones H1 are necessary for the condensation of nucleosome chains into higher-order structures (261 aa)
           
  0.561
tbp2
TATA-box-binding protein 2 (TATA-box factor 2)(TATA-binding factor 2)(TATA sequence-binding protein 2)(TBP-2)(Transcription initiation factor TFIID TBP-2 subunit) (392 aa)
       
      0.550
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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