STRINGSTRING
UBF9 protein (Zea mays) - STRING interaction network
"UBF9" - Ubiquitin-40S ribosomal protein S27a Precursor [Contains Ubiquitin in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBF9Ubiquitin-40S ribosomal protein S27a Precursor [Contains Ubiquitin;40S ribosomal protein S27a]; Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue [...] (155 aa)    
Predicted Functional Partners:
GRMZM2G701288_P01
Uncharacterized protein (467 aa)
     
  0.999
GRMZM2G067974_P03
Hypothetical protein LOC100278397 (LOC100278397), mRNA (491 aa)
     
  0.999
pco064822
Hypothetical protein LOC100193262 (132 aa)
     
  0.999
GRMZM5G827266_P02
40S ribosomal protein S26 (135 aa)
     
  0.999
Zm.89212
40S ribosomal protein S26 (132 aa)
     
  0.999
pco097109
LOC100283674 (108 aa)
     
  0.999
GRMZM2G337815_P01
Uncharacterized protein (111 aa)
     
  0.999
GRMZM2G139349_P01
Hypothetical protein LOC100193720 (108 aa)
     
  0.999
GRMZM2G057608_P01
40S ribosomal protein S25-1 (108 aa)
     
  0.999
Zm.516
Ribosomal protein s6 RPS6-2 (251 aa)
     
  0.999
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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