STRINGSTRING
rpoA protein (Zea mays) - STRING interaction network
"rpoA" - DNA-directed RNA polymerase subunit alpha in Zea mays
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpoADNA-directed RNA polymerase subunit alpha (PEP)(EC 2.7.7.6)(Plastid-encoded RNA polymerase subunit alpha)(RNA polymerase subunit alpha); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (339 aa)    
Predicted Functional Partners:
rpl2-A
50S ribosomal protein L2, chloroplastic ; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA (246 aa)
   
 
  0.999
GRMZM2G436038_P01
Annotation not available (340 aa)
   
 
  0.999
Zm.121933
Uncharacterized transmembrane protein DDB_G0289901-like (1564 aa)
   
  0.999
Zm.23836
Hornerin-like (1499 aa)
   
  0.999
rpoB
DNA-directed RNA polymerase subunit beta (EC 2.7.7.6)(PEP)(Plastid-encoded RNA polymerase subunit beta)(RNA polymerase subunit beta); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1075 aa)
   
  0.997
ZemaCp061
30S ribosomal protein S3, chloroplastic (224 aa)
 
   
  0.996
Zm.86929
50S ribosomal protein L5 (283 aa)
 
   
  0.995
rpl2-B
50S ribosomal protein L2, chloroplastic (150 aa)
   
 
  0.995
rpoC2
DNA-directed RNA polymerase subunit beta’’ (EC 2.7.7.6)(PEP)(Plastid-encoded RNA polymerase subunit beta’’)(RNA polymerase subunit beta’’); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1527 aa)
   
  0.995
GRMZM5G813584_P03
Hypothetical protein LOC100193878 (181 aa)
   
   
  0.994
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Euchlaena, Z. mays, Zea, Zea L., Zea mays, Zea mays L., Zea mays var. japonica, maize
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