STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Csu70Chloroplast stem-loop binding protein of 41 kDa b chloroplastic. (321 aa)    
Predicted Functional Partners:
A0A1R3QF47
Chloroplast stem-loop binding protein of 41 kDa a chloroplastic.
  
 
0.875
Shbp1
Sedoheptulose-17-bisphosphatase chloroplastic.
   
  
 0.751
A0A1D6HQJ5
Lachrymatory-factor synthase.
   
  
 0.742
A0A1D6NN07
DNA-damage-repair/toleration protein DRT102.
  
 
 0.684
Gpb1
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.640
B6SP99_MAIZE
Photosynthetic NDH subunit of subcomplex B 1 chloroplastic.
   
 
  0.538
K7TV49_MAIZE
Photosynthetic NDH subunit of subcomplex B 1 chloroplastic.
   
 
  0.538
PRIN2
Protein PLASTID REDOX INSENSITIVE 2, chloroplastic; Required for the activity of the plastid-encoded RNA polymerase (PEP) and full expression of genes transcribed by PEP.
    
 
 0.534
B6SUJ3_MAIZE
Plastid-specific 30S ribosomal protein 2.
   
  
 0.523
A0A1D6HPY3
NAD(P)-binding Rossmann-fold superfamily protein.
      
 0.510
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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