STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEK1Calpain-type cysteine protease DEK1; Essential protease involved in epiderm development. Required for aleurone cell development in the endosperm probably by maintaining and restricting the aleurone and embryonic epidermal L1 cell-layer fates as well as meristems organization. Involved in the maintenance of adaxial/abaxial axis information in developing leaves, probably by regulating cell proliferation and expansion. Does not need calcium ions to be active. (2159 aa)    
Predicted Functional Partners:
A0A1D6JMT5
Peflin.
   
 0.922
C4J3M8_MAIZE
Putative calcium-binding protein CML48.
   
 0.922
K7V294_MAIZE
Putative calcium-binding protein CML50.
   
 0.922
CR4
Putative receptor protein kinase CRINKLY4; Putative receptor protein kinase. Could play a role in a differentiation signal. The CRINKLY4 (CR4) mutation affects leaf epidermis differentiation such that cell size and morphology are altered, and surface functions are compromised, allowing graft-like fusions between organs.
   
 
 0.874
Sal1
Supernumerary aleurone1.
      
 0.787
A0A1D6KAJ0
Uncharacterized protein.
     
 0.776
A0A1D6L303
Empty pericarp4.
      
 0.752
B4FK57_MAIZE
c-Myc-binding protein.
    
 
 0.745
A0A1D6K135
Guanylate kinase.
    
 
 0.741
Cl30467_1
Guanylate kinase 1.
    
 
 0.741
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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