STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LES22Uroporphyrinogen decarboxylase, chloroplastic; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. (393 aa)    
Predicted Functional Partners:
Prpo1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.937
A0A1D6ENQ1
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.934
A0A1D6GY41
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.933
A0A1D6HAT0
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.931
Prpo2
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
 
 0.929
A0A1D6H1H5
Porphobilinogen deaminase chloroplastic.
  
 0.921
A0A1D6MR94
Protoporphyrinogen oxidase 1 chloroplastic.
  
 
 0.879
B4F938_MAIZE
Necrotic4.
  
 0.846
A0A1D6QSE2
Porphobilinogen deaminase chloroplastic.
  
 0.832
A0A1D6JE05
Coproporphyrinogen III oxidase2.
  
 0.786
Your Current Organism:
Zea mays
NCBI taxonomy Id: 4577
Other names: Z. mays, Zea mays L., Zea mays var. japonica, maize
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