Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lrub_0010 | Lrub_0053 | Lrub_0010 | Lrub_0053 | General secretion pathway protein LspH. | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.477 |
| Lrub_0010 | Lrub_2173 | Lrub_0010 | Lrub_2173 | General secretion pathway protein LspH. | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.785 |
| Lrub_0010 | lspF | Lrub_0010 | Lrub_0008 | General secretion pathway protein LspH. | Type II secretory pathway protein LspF. | 0.927 |
| Lrub_0010 | lspG | Lrub_0010 | Lrub_0009 | General secretion pathway protein LspH. | Type II secretory pathway protein LspG. | 0.934 |
| Lrub_0010 | lspI | Lrub_0010 | Lrub_0011 | General secretion pathway protein LspH. | Type II secretory pathway protein LspI. | 0.962 |
| Lrub_0010 | pilB | Lrub_0010 | Lrub_0051 | General secretion pathway protein LspH. | Pilus assembly protein PilB. | 0.744 |
| Lrub_0010 | pilC | Lrub_0010 | Lrub_0052 | General secretion pathway protein LspH. | Pilus assembly protein PilC. | 0.659 |
| Lrub_0010 | pilE_2 | Lrub_0010 | Lrub_1218 | General secretion pathway protein LspH. | Tfp pilus assembly protein, major type IV pilin class A. | 0.412 |
| Lrub_0053 | Lrub_0010 | Lrub_0053 | Lrub_0010 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | General secretion pathway protein LspH. | 0.477 |
| Lrub_0053 | lspF | Lrub_0053 | Lrub_0008 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretory pathway protein LspF. | 0.870 |
| Lrub_0053 | lspG | Lrub_0053 | Lrub_0009 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretory pathway protein LspG. | 0.616 |
| Lrub_0053 | lspI | Lrub_0053 | Lrub_0011 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretory pathway protein LspI. | 0.535 |
| Lrub_0053 | pilB | Lrub_0053 | Lrub_0051 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Pilus assembly protein PilB. | 0.972 |
| Lrub_0053 | pilC | Lrub_0053 | Lrub_0052 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Pilus assembly protein PilC. | 0.969 |
| Lrub_0053 | pilE_2 | Lrub_0053 | Lrub_1218 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Tfp pilus assembly protein, major type IV pilin class A. | 0.501 |
| Lrub_0053 | pilN | Lrub_0053 | Lrub_1176 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Tfp pilus assembly protein PilN. | 0.478 |
| Lrub_2173 | Lrub_0010 | Lrub_2173 | Lrub_0010 | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | General secretion pathway protein LspH. | 0.785 |
| Lrub_2173 | lspG | Lrub_2173 | Lrub_0009 | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Type II secretory pathway protein LspG. | 0.602 |
| Lrub_2173 | lspI | Lrub_2173 | Lrub_0011 | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Type II secretory pathway protein LspI. | 0.832 |
| Lrub_2173 | pilB | Lrub_2173 | Lrub_0051 | General secretion pathway protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | Pilus assembly protein PilB. | 0.950 |
page 1 of 4