Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Lrub_0053 | Lrub_0297 | Lrub_0053 | Lrub_0297 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | DotB. | 0.744 |
| Lrub_0053 | comA | Lrub_0053 | Lrub_2301 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | DNA uptake/competence protein ComA. | 0.785 |
| Lrub_0053 | comEA | Lrub_0053 | Lrub_2245 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Competence protein ComEA. | 0.759 |
| Lrub_0053 | dprA | Lrub_0053 | Lrub_1748 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | DNA processing enzyme DprA. | 0.819 |
| Lrub_0053 | lspE | Lrub_0053 | Lrub_1342 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.878 |
| Lrub_0053 | lspF | Lrub_0053 | Lrub_0008 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretory pathway protein LspF. | 0.870 |
| Lrub_0053 | pilB | Lrub_0053 | Lrub_0051 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Pilus assembly protein PilB. | 0.972 |
| Lrub_0053 | pilC | Lrub_0053 | Lrub_0052 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Pilus assembly protein PilC. | 0.969 |
| Lrub_0053 | pilT | Lrub_0053 | Lrub_0939 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Twitching motility protein PilT. | 0.808 |
| Lrub_0053 | uptC | Lrub_0053 | Lrub_2088 | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | Type II secretion system protein. | 0.821 |
| Lrub_0297 | Lrub_0053 | Lrub_0297 | Lrub_0053 | DotB. | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.744 |
| Lrub_0297 | comA | Lrub_0297 | Lrub_2301 | DotB. | DNA uptake/competence protein ComA. | 0.495 |
| Lrub_0297 | lspF | Lrub_0297 | Lrub_0008 | DotB. | Type II secretory pathway protein LspF. | 0.778 |
| Lrub_0297 | pilB | Lrub_0297 | Lrub_0051 | DotB. | Pilus assembly protein PilB. | 0.400 |
| Lrub_0297 | pilC | Lrub_0297 | Lrub_0052 | DotB. | Pilus assembly protein PilC. | 0.788 |
| comA | Lrub_0053 | Lrub_2301 | Lrub_0053 | DNA uptake/competence protein ComA. | Type 4 (IV) prepilin-like protein leader peptide processing enzyme PilD; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.785 |
| comA | Lrub_0297 | Lrub_2301 | Lrub_0297 | DNA uptake/competence protein ComA. | DotB. | 0.495 |
| comA | comEA | Lrub_2301 | Lrub_2245 | DNA uptake/competence protein ComA. | Competence protein ComEA. | 0.601 |
| comA | dprA | Lrub_2301 | Lrub_1748 | DNA uptake/competence protein ComA. | DNA processing enzyme DprA. | 0.885 |
| comA | lspE | Lrub_2301 | Lrub_1342 | DNA uptake/competence protein ComA. | Type II protein secretion ATPase LspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. | 0.605 |
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