STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0131Regulatory protein (GGDEF and EAL domains). (100 aa)    
Predicted Functional Partners:
Lrub_0189
GGDEF domain-containing sensory box protein.
  
 0.998
Lrub_1459
Regulatory protein (GGDEF and EAL domains).
  
 0.998
smc_4
Chromosome partition protein Smc.
  
 0.998
Lrub_0168
Sensory box protein.
  
 0.997
stuC_1
Sensor histidine kinase.
  
 0.997
Lrub_0166
Sensory box histidine kinase/response regulator.
  
 0.995
Lrub_0167
Two component response regulator.
  
 0.995
Lrub_0337
Two component response regulator.
  
 0.995
cpxR
Transcriptional regulatory protein CpxR.
  
 0.995
lrpR
DNA-binding response regulator.
  
 0.995
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.