STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0153Hypothetical protein. (332 aa)    
Predicted Functional Partners:
Lrub_0152
Hypothetical protein.
       0.648
Lrub_0154
Hypothetical protein.
 
   
0.604
Lrub_2821
Hypothetical protein.
  
     0.576
Lrub_1424
Ankyrin 3.
  
     0.536
Lrub_1603
Tubulin-tyrosine ligase family protein.
  
     0.533
Lrub_0151
Transcription activator.
       0.489
Lrub_1469
Ankyrin repeats (3 copies).
  
     0.487
Lrub_1300
Leucine-rich repeat protein substrate of the Dot/Icm secretion system.
  
     0.452
Lrub_0663
SAM-dependent O-methyltransferase.
  
     0.436
Lrub_0358
Hypothetical protein.
  
     0.423
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.