Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_0175GNAT family acetyltransferase. (205 aa)    
Predicted Functional Partners:
Lrub_0176
Amine oxidase, flavin containing.
       0.628
bcp
Acetylpolyamine aminohydrolase.
 
     0.594
Lrub_0064
Phosphate acetyl/butaryl transferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.589
rfbA
Phosphomannose isomerase GDP mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.506
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
  0.501
Lrub_0834
Oxaloacetate decarboxylase subunit alpha.
     
  0.486
Lrub_1766
2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion.
     
  0.469
Lrub_0177
Short chain-specific acyl CoA dehydrogenase.
    
  0.453
Lrub_0178
Arginine-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
    
  0.453
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.450
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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