STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0177Short chain-specific acyl CoA dehydrogenase. (564 aa)    
Predicted Functional Partners:
yfcX
Enoyl CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.968
fadB
3-hydroxyacyl CoA dehydrogenase oxidoreductase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.966
Lrub_2292
3-hydroxyisobutyryl-CoA hydrolase.
  
 0.887
etfA
Electron transfer flavoprotein subunit alpha.
 
 
 0.841
Lrub_0178
Arginine-binding periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
  
    0.797
etfB
Electron transfer flavoprotein subunit beta.
 
 
 0.790
fadD-1
Long chain fatty acid-CoA ligase.
 
 
 0.735
Lrub_1019
Enoyl CoA hydratase/isomerase (crotonase).
  
 0.703
pta_1
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.701
pta_2
Bifunctional enoyl-CoA hydratase/phosphate acetyltransferase.
  
 0.701
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: low (26%) [HD]