STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0264ABC transporter permease. (376 aa)    
Predicted Functional Partners:
Lrub_0265
ABC transporter ATP binding protein.
 
 0.998
Lrub_0266
ABC transport system periplasmic substrate binding protein.
 
 0.990
yrbD
Toluene transporter subunit: membrane component of ABC superfamily protein.
 
 0.990
ttg2A
Toluene tolerance ABC transporter ATP binding protein Ttg2A.
 
 0.982
Lrub_0267
Transport protein.
 
 
  0.885
Lrub_1915
Putative transmembrane protein.
  
 0.817
ttg2B
Toluene tolerance protein Ttg2B.
  
  
 
0.762
Lrub_1232
Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor).
  
 0.697
pal
Peptidoglycan-associated lipoprotein precursor (19 kDa surface antigen) (PPL); Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
  
  0.667
ttg2D
Toluene tolerance protein Ttg2D.
  
 
 0.651
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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