STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0280Type II/III secretion system protein. (253 aa)    
Predicted Functional Partners:
Lrub_1270
General secretion pathway protein C.
  
 
 0.961
pilZ_2
Type IV pilus assembly PilZ.
  
     0.764
iraA
Small-molecule methyltransferase IraA.
  
     0.759
fliH
Polar flagellar assembly protein FliH.
 
  
 0.758
Lrub_2783
Hypothetical protein.
  
     0.758
Lrub_1753
Hypothetical protein.
  
     0.725
Lrub_1182
DamX-related protein.
  
     0.724
Lrub_1263
Hypothetical protein.
  
     0.724
Lrub_1756
Acid sphingomyelinase-like phosphodiesterase.
  
     0.710
Lrub_0856
Ankyrin repeat-containing protein.
  
     0.704
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.