STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0298DotA. (999 aa)    
Predicted Functional Partners:
Lrub_2009
Protein IcmE (DotG).
 
 
   0.968
Lrub_0301
IcmX (IcmY).
   
   0.943
Lrub_2008
IcmK protein.
 
 
   0.932
icmV
Intracellular multiplication protein IcmV.
       0.870
Lrub_2010
Protein IcmG (DotF).
    
 
 0.813
Lrub_2003
Protein IcmO (DotL).
 
   
 0.800
dotC
Defect in organelle trafficking lipoprotein DotC.
 
   
 0.793
Lrub_0969
Ankyrin repeat domain-containing protein.
  
 
   0.784
Lrub_2007
Protein IcmL (DotI).
  
     0.773
enhA_1
Enhanced entry protein EnhA.
  
     0.772
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: medium (66%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.