STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icmWIntracellular multiplication protein IcmW. (151 aa)    
Predicted Functional Partners:
Lrub_1999
Protein IcmS.
    
 
 0.942
Lrub_1680
Virulence protein.
    
 
 0.932
Lrub_2003
Protein IcmO (DotL).
    
 
 0.931
Lrub_0301
IcmX (IcmY).
     
 0.824
rssA
Esterase of the alpha-beta hydrolase superfamily protein.
    
   0.669
icmV
Intracellular multiplication protein IcmV.
     
 0.647
Lrub_0298
DotA.
       0.598
Lrub_0696
Hypothetical protein.
    
 
 0.497
Lrub_0740
Conjugative coupling factor TraD.
    
 
 0.497
Lrub_1810
Conjugative coupling factor TraD.
    
 
 0.497
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.