Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_0423Tryptophan/tyrosine permease. (398 aa)    
Predicted Functional Partners:
Lrub_0424
Outer membrane protein, OmpA family protein.
       0.749
Lrub_0422
Tryptophan/tyrosine permease.
 
    
0.673
kup
KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.
       0.647
Lrub_2003
Protein IcmO (DotL).
  
     0.572
Lrub_2007
Protein IcmL (DotI).
  
     0.514
enhA_4
Enhanced entry protein EnhA.
  
     0.514
Lrub_2005
Protein IcmL (DotI).
  
     0.509
dotC
Defect in organelle trafficking lipoprotein DotC.
  
     0.505
Lrub_2014
Protein IcmB (DotO).
  
     0.504
Lrub_0035
Enhanced entry protein EnhA.
  
     0.475
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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