STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0426Hypothetical protein. (333 aa)    
Predicted Functional Partners:
Lrub_0427
Spore maturation protein A.
       0.755
spmB
Spore maturation protein B.
       0.755
Lrub_0298
DotA.
  
     0.753
Lrub_0969
Ankyrin repeat domain-containing protein.
  
 
  0.706
Lrub_2009
Protein IcmE (DotG).
  
     0.699
Lrub_2608
Putative helicase/relaxase.
  
     0.689
pepA
Aminopeptidase A/I; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
  
 0.664
Lrub_2606
Cysteine protease.
  
 
 0.660
enhA_1
Enhanced entry protein EnhA.
  
     0.647
Lrub_1605
Hypothetical protein.
  
     0.645
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.