STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilZ_1Type 4 fimbrial biogenesis protein PilZ. (114 aa)    
Predicted Functional Partners:
stuC_1
Sensor histidine kinase.
    
 0.978
Lrub_0189
GGDEF domain-containing sensory box protein.
    
 
 0.976
Lrub_1459
Regulatory protein (GGDEF and EAL domains).
    
 
 0.976
Lrub_0168
Sensory box protein.
    
   0.973
Lrub_1215
Two component histidine kinase.
    
   0.973
Lrub_1870
Regulatory protein (GGDEF domain).
  
 
  0.826
pilB
Pilus assembly protein PilB.
  
 
 
 0.824
pilM
Tfp pilus assembly protein, ATPase PilM.
  
   
 0.815
holB
DNA polymerase III subunit delta'.
     
 0.814
Lrub_0469
Deoxyribonuclease TatD.
  
    0.812
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.