Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0476Signal peptide protein. (92 aa)    
Predicted Functional Partners:
Lrub_0478
Hypothetical protein; Belongs to the UPF0276 family.
 
  
 0.995
Lrub_0477
Hypothetical protein.
 
  
 0.987
cybA
Cytochrome b561 transmembrane protein.
 
     0.882
yceI
Polyprenyl-pyrophosphate binding protein; Belongs to the UPF0312 family.
 
     0.870
Lrub_0473
Putative YceI-like family protein; Belongs to the UPF0312 family.
 
     0.865
lvhB3
Type IV secretion system protein VirB3.
   
    0.833
Lrub_0698
Hypothetical protein.
   
    0.587
Lrub_0699
Hypothetical protein.
   
    0.587
Lrub_0700
Hypothetical protein.
   
    0.586
ctpA_1
Cation efflux transporter.
   
    0.569
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.