STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0479Multidrug resistance protein D. (393 aa)    
Predicted Functional Partners:
Lrub_2223
Major facilitator superfamily (MFS) transporter.
  
     0.772
Lrub_0481
Major facilitator family transporter.
 
  
  0.678
anmK
anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.
       0.609
Lrub_0473
Putative YceI-like family protein; Belongs to the UPF0312 family.
 
     0.483
Lrub_1904
MFS transporter DHA2 family multidrug resistance protein B; Belongs to the major facilitator superfamily.
  
   
 0.449
Lrub_1438
2-acylglycerophosphoethanolamine acyltransferase.
   
 
 0.448
Lrub_0476
Signal peptide protein.
       0.430
Lrub_0477
Hypothetical protein.
       0.430
Lrub_0478
Hypothetical protein; Belongs to the UPF0276 family.
       0.430
cybA
Cytochrome b561 transmembrane protein.
       0.411
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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