Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Lrub_0483Glycosyl transferase, family 2. (240 aa)    
Predicted Functional Partners:
Lrub_0482
Squalene and phytoene synthase.
  
  
 0.779
capI_1
Protein capI.
 
 
 0.517
Lrub_0528
Glycosyltransferase, family 2.
 
  
 0.476
rfbA
Phosphomannose isomerase GDP mannose pyrophosphorylase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
 0.466
galU
Glucose-1-phosphate uridylyltransferase.
    
 0.449
Lrub_0573
Polysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.441
Lrub_0484
Eukaryotic DNA topoisomerase I, catalytic core.
       0.432
wzt
ABC transporter of LPS O-antigen.
 
  
 0.425
Lrub_0120
Putative glycosyl transferase.
 
  
 0.416
Lrub_2255
Lipopolysaccharide biosynthesis glycosyltransferase.
 
   
 0.413
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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