STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0521Regulatory protein (EAL domain). (536 aa)    
Predicted Functional Partners:
Lrub_1208
Regulatory protein (GGDEF domain).
 
 
 0.913
Lrub_1875
Sensor histidine kinase.
 
 
 0.912
Lrub_0886
GGDEF/EAL domain-containing sensory box protein.
 
 
  0.898
Lrub_2753
Regulatory protein (GGDEF, PAS, PAC domains).
 
 0.896
Lrub_0776
Diguanylate kinase.
 0.873
bioA
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.870
Lrub_0522
Hypothetical protein.
       0.870
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.870
Lrub_2451
Sensory box protein.
 
 0.863
Lrub_2746
Regulatory protein (GGDEF, EAL, PAS and PAC domains).
 
 
 0.831
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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