STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lidK(CDP-alcohol) phosphatidyltransferase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (255 aa)    
Predicted Functional Partners:
Lrub_1438
2-acylglycerophosphoethanolamine acyltransferase.
    
 0.686
enhB_1
Enhanced entry protein EnhB.
       0.629
Lrub_0611
Hypothetical protein.
       0.629
Lrub_0613
Structural toxin protein (hemagglutinin/hemolysin) RtxA.
     
 0.629
Lrub_0872
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.622
Lrub_0612
Putative thiol-disulfide isomerase.
       0.609
Lrub_0621
Hypothetical protein.
  
     0.592
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.590
Lrub_1577
Ribonuclease, T2 family; Belongs to the RNase T2 family.
  
     0.590
Lrub_1623
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.590
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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