STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0621Hypothetical protein. (299 aa)    
Predicted Functional Partners:
Lrub_0620
Carbon storage regulator CsrA.
       0.870
Lrub_1553
Transmembrane protein.
  
 
   0.865
Lrub_1756
Acid sphingomyelinase-like phosphodiesterase.
 
  
  0.805
Lrub_0856
Ankyrin repeat-containing protein.
  
 
  0.792
yjeA
Endo-1,4-beta-xylanase.
  
 
  0.792
Lrub_2783
Hypothetical protein.
  
    0.783
iraA
Small-molecule methyltransferase IraA.
  
     0.765
Lrub_1753
Hypothetical protein.
  
     0.764
Lrub_1263
Hypothetical protein.
  
     0.749
Lrub_1561
Fe-S protein.
  
     0.742
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.