STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lly4-hydroxyphenylpyruvate dioxygenase. (353 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase.
 
 0.991
Lrub_0666
Glutathione S-transferase (maleylacetoacetate isomerase).
 
  
 0.970
Lrub_0665
Fumarylacetoacetate hydrolase.
 
  
 0.960
Lrub_2046
Phenylalanine-4-hydroxylase.
 
  
 0.919
Lrub_1020
Acetyl/propionyl-CoA carboxylase, beta subunit.
  
 
 0.888
Lrub_2185
Pterin-4-alpha-carbinolamine dehydratase.
  
  
 0.799
Lrub_0662
Glu/Leu/Phe/Val dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
 
  
 0.766
Lrub_0834
Oxaloacetate decarboxylase subunit alpha.
  
 
  0.698
Lrub_0663
SAM-dependent O-methyltransferase.
  
  
 0.697
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.696
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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