Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
lly4-hydroxyphenylpyruvate dioxygenase. (353 aa)    
Predicted Functional Partners:
hmgA
Homogentisate 1,2-dioxygenase.
 
 0.998
Lrub_0666
Glutathione S-transferase (maleylacetoacetate isomerase).
 
  
 0.985
Lrub_0665
Fumarylacetoacetate hydrolase.
 
  
 0.980
Lrub_2046
Phenylalanine-4-hydroxylase.
 
  
 0.956
hisC-2
Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.881
korA
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.880
hisC
Histidinol-phosphate aminotransferase (Imidazole acetol-phosphate transaminase).
    
 0.860
Lrub_2185
Pterin-4-alpha-carbinolamine dehydratase.
  
  
 0.846
Lrub_1574
Amidase; Belongs to the amidase family.
  
 
  0.845
Lrub_2713
Aspartate aminotransferase.
   
 
 0.845
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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