STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lvhB_6Vir protein. (828 aa)    
Predicted Functional Partners:
Lrub_0699
Hypothetical protein.
 
 
 0.987
Lrub_0698
Hypothetical protein.
 
 
 0.986
lvhB3
Type IV secretion system protein VirB3.
  
 
 0.984
Lrub_0701
Hypothetical protein.
 
 
 0.974
Lrub_0700
Hypothetical protein.
  
 
 0.966
Lrub_0697
Hypothetical protein; Part of the Type IV secretion system. Belongs to the GSP E family.
 
  
 0.943
Lrub_0696
Hypothetical protein.
 
  
 0.905
lvhB_5
Vir protein B5.
    
 0.861
lvhB_7
Vir protein.
       0.800
Lrub_2009
Protein IcmE (DotG).
 
 
 0.774
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.