STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lrub_0740Conjugative coupling factor TraD. (668 aa)    
Predicted Functional Partners:
Lrub_0739
Hypothetical protein.
       0.800
Lrub_0741
Hypothetical protein.
       0.800
Lrub_0757
Bile acid beta-glucosidase.
 
     0.788
Lrub_0746
Type IV secretory protein VirB4 component.
 
  
 0.783
Lrub_1816
Type IV secretory protein VirB4 component.
 
  
 0.783
Lrub_0747
Hypothetical protein.
 
     0.780
Lrub_0748
Membrane protein.
 
     0.780
Lrub_0749
Hypothetical protein.
 
     0.780
Lrub_0750
Hypothetical protein.
 
     0.780
Lrub_0755
Hypothetical protein.
 
     0.780
Your Current Organism:
Legionella rubrilucens
NCBI taxonomy Id: 458
Other names: ATCC 35304, CCUG 29671, CIP 103848, DSM 11884, JCM 7565, L. rubrilucens, NCTC 11987, strain WA-270A-C2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.